Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950863.1_cds_XP_016491133.1_81481
CDS Infomation

[gene=LOC107810817] [db_xref=GeneID:107810817] [protein=receptor-like protein kinase HAIKU2] [protein_id=XP_016491133.1] [location=join(35300..37931,38041..38414)] [gbkey=CDS]
Sequence

ATGGCAATAATGGAGCTCCTGATTGGATTTGTCTCCCCTCATGAAATGACCCTTTTGCCC
TTTCCAATTTCAACAATGGCAAGAATCCAAAGACTCCACTCCCTCCAAATTCTTGCCACT
TTCTTACTTTTGGTTTTGTTTTTTCAGCCATCCAAGTCCTTAACTGCTGAAACTCAGGCC
CTTTTACATTTCAAAGAGCAGCTCAATGACCCTTTGAGTTACTTGGATTCTTGGAAAGAC
TCAGAAACTCCTTGTAAATTCAATGGAATTACATGTGATCAAAATACTGGTCTTGTTACT
GAAATTTCCCTTGACAACAAGTCCATTTCTGGGGTAATTTCCCCTTCAATATTTTCACTC
AAAAGCCTCACTTCTTTGGTGCTACCTTCAAATTCTTTATCAGGGAACCTTCCAAGTGAA
ATAACCAACTGCACCAATCTCAAAATCTTGAATGTCACTGGAAATGACATGAATGGAACC
ATACCTGATTTATCTAAGTTGACTAACTTAGAAGTTTTAGACTTGTCTATAAACTACTTT
TCAGGAAAGTTCCCATCTTGGGTTGGAAATTTTACTAGTTTGGTTGCACTAGGCCTAGGG
GATAATGACTTTGTTGAAGGTAAAATTCCTGAGACTCTTGGGAATTTAAAGAAAGTGTAT
TGGCTTTACTTGGCAGGCTCAAATTTGATAGGAGAAATCCCAGAATCCATTTTTGAAATG
GAGGCACTAGGAACATTGGATATTTCAAGAAATCAGATTTCTGGGAATTTCCCAAAGTAT
ATAAACAAGCTGAAAAATTTATGGAAAATTGAGCTGTTTCAAAATAAGTTGACAGGTGAA
CTTCCTGTAGAACTTGCAGACCTCTCTCTTTTGCAGGAATTTGATATTTCTAGCAACCAG
ATGTACGGGAAGCTGCCCCCGGGAATCGGGAACCTGAAGAAGTTAACAGTGTTTCAAATA
TTCAAGAATAACTTCTCTGGTGAAATTCCTCCTGCTTTTGGAGAAATGCAGCATCTTGAT
GCCTTTTCTGTGTACAGGAACAGTTTTTCTGGGGCATTTCCAGCAAATCTTGGTCGGTTT
TCGCCCCTGAATAGCATAGACATATCTGAAAACAAATTTACTGGTGGATTCCCAAAATAC
TTGTGCCAAAATGGGAACTTGCAGTTTTTGCTAGCTATTGAGAACAGTTTCTCAGGGGAG
TTTCCAAGTACTTATTCCTCTTGTAAGTCTTTACAGAGATTGAGGGTAAGTAATAATCAA
CTTTCTGGGAAAATATCTGATGGTGTATGGGGACTTCCAAATGTGTTGATGCTGGATTTC
AGTGATAATAAGTTCAGTGGAACTATATCTCCTGATATTGGGACTGCTACTAGCTTGAGT
CAGTTGGTGTTATCAAATAACAGATTTTCAGGTGAGCTTCCAAAAGAAGTTGGGAAACTC
ACACAATTGGAAAGGCTGTACTTGGATAACAATGAATTCTCCGGCGCAATACCTTCTGAG
CTTGGTAAACTGAAGCAACTTTCATCTTTGCATTTGGAGAAGAACTCATTCTCAGGGACA
ATCCCATCAGAATTGGGTGAATTTCCTAGGCTTGCAGACCTGAATCTTGCTTCAAATCTT
CTTACAGGTAGCATTCCCAATTCTTTATCGACAATGACATCTTTGAACTCTCTGAATCTT
TCACACAACAGGCTCACTGGTAAAATACCGACTAGCTTGGACAATCTGAAGCTGTCGTCG
TTAGATCTCTCTAACAACCAGCTATCAGGAGAAGTTTTATTGGATCTTTTAACAATGGGA
GGAGATAAGGCATTTGCTGATAACAAGGGACTTTGTGTTGACGAAAGCATCAAATTCTCA
ATGAACTCGGGCTTGGGGGGTTGTGGTGGAAAGGCTGCTCAACACAAGTTAAACAAACTA
GTTGTATTTTGCATTGTGTTGCTTTCCTTAGCTGTTCTAATGGGCGGTTTATTGCTTGTC
AGTTACCTAAACTACAAGCATAGTCATGAAGGGGATCCTGAAGAACAGCTGGAGGAAGCC
AAGGGAACAAATCCAAAATGGAAGCTAGAGAACTTCCACCATGTGGAATTTGATGCAGAT
GATGTTTGTGGTTTCGACGAAGACAATTTGATTGGAAGTGGAGGTACGGGGAAAGTTTAT
CGGTTAGACTTGAAGAAAGGTTGTGGAACTGTAGCTGTGAAGCAGCTGTGGAAAGGGAAT
GGTGTGAAAGTTTTGACAAGGGAAATGGAAATTTTGGGGAAAATCAGGCACAGAAATATA
GTAAAGTTGTATGCCAGTCTAATGAAAGAAGGTTCAAATTTCTTGGTTTTCGAGTACATG
CCAAATGGTAATCTTTTCGAGGCACTACATCGAGAGATCAAGGCTGGCAAGCCAGAATTA
GATTGGTACCAGAGATATAAAATAGCACTCGGAGCTGCAAAGGGAATTGCTTATCTGCAC
CATGATTGTTGCCCTCCTATTATTCATAGAGATATTAAATCAACGAACATTCTACTTGAT
GAGGATTATGAAGCAAAAGTTTCAGATTTTGGGGTTGCAAAAGTCTCAGAAATTTCTTCT
AGGGGATCCGAGCTCAGTTGTTTTGCAGGCACTCATGGTTACATGGCTCCTGAAATGGCA
TATACTCTGAGAGTAACAGAAAAGAGTGACATTTACAGCTTTGGCGTCGTGCTATTGGAA
CTAGTAACGGGAAGAAAACCAATAGAAGATGCATTTGGAGAAGGCAAAGACTTGGTCTAC
TGGACGTCAACTCATTTAAATGACAAGGAAAGCATTGTCAAAGTTCTCGATCAGAAGGTG
GTTTCTGAACTTGTTCAGGAAGACATGATCAAAGTGCTGAGAATCGCCACACTTTGTACA
ACTAAGCTTCCTAATTTGCGCCCCAACATGAAAGAAGTTGTCAAGTTGCTTGTTGATGCT
GAACCTTGGACATTTAGATCTTCAAGCAAATCTGAGAAAAAGGGGCACAATTTTTCTGAG
GTCTAG

Peptide Sequence

PEP ID

XP_016491133.1
PEP Infomation

PREDICTED: receptor-like protein kinase HAIKU2 [Nicotiana tabacum]
Sequence

MAIMELLIGFVSPHEMTLLPFPISTMARIQRLHSLQILATFLLLVLFFQPSKSLTAETQA
LLHFKEQLNDPLSYLDSWKDSETPCKFNGITCDQNTGLVTEISLDNKSISGVISPSIFSL
KSLTSLVLPSNSLSGNLPSEITNCTNLKILNVTGNDMNGTIPDLSKLTNLEVLDLSINYF
SGKFPSWVGNFTSLVALGLGDNDFVEGKIPETLGNLKKVYWLYLAGSNLIGEIPESIFEM
EALGTLDISRNQISGNFPKYINKLKNLWKIELFQNKLTGELPVELADLSLLQEFDISSNQ
MYGKLPPGIGNLKKLTVFQIFKNNFSGEIPPAFGEMQHLDAFSVYRNSFSGAFPANLGRF
SPLNSIDISENKFTGGFPKYLCQNGNLQFLLAIENSFSGEFPSTYSSCKSLQRLRVSNNQ
LSGKISDGVWGLPNVLMLDFSDNKFSGTISPDIGTATSLSQLVLSNNRFSGELPKEVGKL
TQLERLYLDNNEFSGAIPSELGKLKQLSSLHLEKNSFSGTIPSELGEFPRLADLNLASNL
LTGSIPNSLSTMTSLNSLNLSHNRLTGKIPTSLDNLKLSSLDLSNNQLSGEVLLDLLTMG
GDKAFADNKGLCVDESIKFSMNSGLGGCGGKAAQHKLNKLVVFCIVLLSLAVLMGGLLLV
SYLNYKHSHEGDPEEQLEEAKGTNPKWKLENFHHVEFDADDVCGFDEDNLIGSGGTGKVY
RLDLKKGCGTVAVKQLWKGNGVKVLTREMEILGKIRHRNIVKLYASLMKEGSNFLVFEYM
PNGNLFEALHREIKAGKPELDWYQRYKIALGAAKGIAYLHHDCCPPIIHRDIKSTNILLD
EDYEAKVSDFGVAKVSEISSRGSELSCFAGTHGYMAPEMAYTLRVTEKSDIYSFGVVLLE
LVTGRKPIEDAFGEGKDLVYWTSTHLNDKESIVKVLDQKVVSELVQEDMIKVLRIATLCT
TKLPNLRPNMKEVVKLLVDAEPWTFRSSSKSEKKGHNFSEV

Transcript Sequence

Gene sequence data has not been registered.